Bioinfo List June 2025

bioinfo-list@seqshare.org

1 participants
2 discussions

Got 10 minutes? Share your work at our next Bioinformatics CoP!
by Pernille Nilsson 30 Jun '25

30 Jun '25

Dear Bioinformatics Community, We have an open spot for a presentation at our next CoP session on 7 August. If you or someone you know would like to give a 10-minute presentation we would love to hear from you! As a reminder, the SeqAfrica Bioinformatic Community of Practise has a monthly meet-up for everyone passionate about bioinformatics. Each session features a stand-up round where participants share their current projects, followed by a "Soapbox" segment showcasing scientific talks, tool demonstrations or discussions of new developments in the field. Previous sessions have encompassed tool demonstrations of AMRomics and hARMonize, a presentation on Marburg virus outbreak investigations in Rwanda, and a script presentation for SNP detection in V. cholerae. Looking forward to hearing from you! Kind regards, Pernille [http://www.dtu.dk/-/media/DTU_Generelt/Andet/mail-signature-logo.png] Dr Pernille Nilsson Project Manager SeqAfrica Pronouns: she, her Mob. +45 22 13 75 50 pnil(a)food.dtu.dk<mailto:pnil@food.dtu.dk> National Food Institute Research Group for Global Capacity Building Henrik Dams Allé Building 204 2800 Kgs. Lyngby www.food.dtu.dk<http://www.food.dtu.dk/>

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Reminder: SeqAfrica Bioinformatics CoP June
by Pernille Nilsson 24 Jun '25

24 Jun '25

Dear Bioinformatics Community of Practise Members, This is a gentle reminder that we have our June session coming up on Thursday! Sade Magabotha will be presenting her script which looks for SNPs in Vibrio cholerae datasets. The github page is here https://github.com/Shaedeycool/Vibrio_SNPs. The script is set to look for SNPs with 90% similarity to the sequences in the database covering 90% of the entire length of the sequences of interest for biotype and serotype. Join us to learn more about this script! Date: Thursday 26 June 2025 Time: 12:30 CEST Zoom link: https://dtudk.zoom.us/j/68532308758?pwd=AK8CRJQaskd7BvavJZ8RapDJ63baCg.1 Meeting ID: 685 3230 8758 Passcode: 210273 We look forward to seeing you there! Best wishes, Pernille [http://www.dtu.dk/-/media/DTU_Generelt/Andet/mail-signature-logo.png] Dr Pernille Nilsson Project Manager SeqAfrica Pronouns: she, her Mob. +45 22 13 75 50 pnil(a)food.dtu.dk<mailto:pnil@food.dtu.dk> National Food Institute Research Group for Global Capacity Building Henrik Dams Allé Building 204 2800 Kgs. Lyngby www.food.dtu.dk<http://www.food.dtu.dk/>

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